Description

major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:4942]

Location
Gene

This transcript is a product of gene ENSG00000196735

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
HLA-DQA1-001ENST000003431391591ENSP00000339398255Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS4752YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQA1-004ENST000003953631206ENSP00000378767255Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS4752YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQA1-009ENST000003749491060ENSP00000364087255Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS4752YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQA1-007ENST00000496318696ENSP00000437302214Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
HLA-DQA1-010ENST00000422863520ENSP0000040579724Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
HLA-DQA1-002ENST000004827452135ENSP0000043654653Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
HLA-DQA1-003ENST000004606335450No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 6 Coding exons: 2 Transcript length: 2,135 bps Translation length: 53 residues

Ensembl version

ENST00000482745.1

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000272918 (version 2)

Transcript-based displays