Human (GRCh38.p14)
Description

pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]

Gene Synonyms

FBP-11, FBP11, FLAF1, FLJ20585, FNBP3, HIP10, HYPA, NY-REN-6, PRP40

About this transcript

This transcript has 4 exons, is associated with 11355 variant alleles and maps to 228 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000545856.8PRPF40A-2127515972aaENSP00000444656.4
 
Protein coding
CCDS92876F5H578 NM_001365597.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000410080.8PRPF40A-2028048994aaENSP00000386458.4
 
Protein coding
CCDS92879A0A7N4I394 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000698772.1PRPF40A-2157401934aaENSP00000513920.1
 
Protein coding
CCDS92878A0A8V8TM61 -GENCODE basicAPPRIS ALT1
ENST00000698773.1PRPF40A-2163561931aaENSP00000513921.1
 
Protein coding
A0A8V8TM87 -GENCODE basicAPPRIS ALT1
ENST00000696381.1PRPF40A-2132915957aaENSP00000512591.1
 
Protein coding
O75400-1 -GENCODE basic
ENST00000696382.1PRPF40A-2142805915aaENSP00000512592.1
 
Protein coding
CCDS92877A0A8Q3SIG7 -GENCODE basic
ENST00000493468.7PRPF40A-2111121367aaENSP00000441656.2
 
Protein coding
H0YG38 -TSL:1CDS 3' incomplete
ENST00000448428.2PRPF40A-203490157aaENSP00000406924.2
 
Protein coding
H7C2N3 -TSL:5CDS 3' incomplete
ENST00000354363.11PRPF40A-2011622101aaENSP00000346332.7
 
Nonsense mediated decay
O75400-5 -TSL:2
ENST00000486100.1PRPF40A-209569No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000489741.1PRPF40A-210776No protein-
 
Retained intron
--TSL:3
ENST00000467114.2PRPF40A-205546No protein-
 
Retained intron
--TSL:4
ENST00000450303.6PRPF40A-204496No protein-
 
Retained intron
--TSL:3
ENST00000471167.1PRPF40A-206333No protein-
 
Retained intron
--TSL:2
ENST00000471701.1PRPF40A-207293No protein-
 
Retained intron
--TSL:2
ENST00000472760.1PRPF40A-208243No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 4, Coding exons: 0, Transcript length: 496 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000450303.6

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.