Description

ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 [Source:HGNC Symbol;Acc:HGNC:811]

Synonyms

ATP2A, SERCA1

Location
Gene

This transcript is a product of gene ENSG00000196296

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
ATP2A1-002ENST000003955033536 bp994 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42139B3KS35 H3BUU3 O14983
NM_004320
NP_004311
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP2A1-001ENST000003570843532 bp1001 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10643H3BUU3 O14983 NM_173201
NP_775293
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP2A1-003ENST000005363763130 bp869 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS66997B3KS35 H3BUU3 O14983
NM_001286075
NP_001273004
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP2A1-008ENST00000562185576 bp26 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BUU3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATP2A1-007ENST00000563975545 bp114 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BVB2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATP2A1-010ENST00000564112195 bp24 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATP2A1-009ENST00000564732831 bp128 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATP2A1-005ENST00000564470467 bp41 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BTF1 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATP2A1-006ENST00000565042239 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Statistics

Exons: 22 Coding exons: 22 Transcript length: 3,532 bps Translation length: 1,001 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10643

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14983

Ensembl version

ENST00000357084.4

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays