Description

major histocompatibility complex, class II, DR beta 1 [Source:HGNC Symbol;Acc:HGNC:4948]

Synonyms

HLA-DR1B

Location
About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 460 variations and maps to 18 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HLA-DRB1-001ENST000003600041229266aaENSP00000353099
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47409D7RIH8 P01911 P04229
Q29974 Q9GIY3 X5DNQ0
NM_002124
NP_002115
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
HLA-DRB1-201ENST00000611060920266aaENSP00000480667
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WX18 -TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1APPRIS candidate principal isoform that is conserved in at least three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 6 Coding exons: 6 Transcript length: 1,229 bps Translation length: 266 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS47409

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01911, P04229, Q29974, Q9GIY3

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000360004.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays