Description

ceroid-lipofuscinosis, neuronal 3 [Source:HGNC Symbol;Acc:2074]

Location
Gene

This transcript is a product of gene ENSG00000188603

This gene has 41 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
CLN3-001ENST000005694302374ENSP00000454229438Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS10632YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-205ENST000003600191913ENSP00000353116438Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS10632YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-204ENST000003599841877ENSP00000353073438Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS10632YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-206ENST000005353921712ENSP00000443221360Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-201ENST000003546301619ENSP00000346650421Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-006ENST000003334961580ENSP00000329171414Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-007ENST000003956531577ENSP00000379014338Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-202ENST000003554771526ENSP00000347660390Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-012ENST000003578571519ENSP00000350523384Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-008ENST000003578061469ENSP00000350457339Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-005ENST000005679631325ENSP00000455387341Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-020ENST000005653161266ENSP00000456117421Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-017ENST00000568443886ENSP00000454899175Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CLN3-203ENST00000357076879ENSP00000349586253Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-009ENST00000568558735ENSP00000455603184Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CLN3-030ENST00000565688650ENSP00000456122176Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CLN3-031ENST00000561505609ENSP00000457615121Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CLN3-014ENST00000565778569ENSP00000458015167Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CLN3-027ENST00000567804557ENSP0000045536574Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CLN3-035ENST000005651401225ENSP00000455342181Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
CLN3-011ENST000005684221224ENSP00000455549132Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
CLN3-019ENST000005690301109ENSP00000454680253Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
CLN3-018ENST00000566057931ENSP00000456693105Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
CLN3-015ENST00000567495762ENSP00000456013181Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
CLN3-010ENST00000568497577ENSP0000045641482Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
CLN3-034ENST00000564091539ENSP00000454466135Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
CLN3-026ENST00000567160616No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CLN3-029ENST00000565236582No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
CLN3-024ENST00000566816570No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
CLN3-028ENST00000566472551No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
CLN3-025ENST00000566040544No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
CLN3-032ENST00000568472477No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
CLN3-016ENST00000565047461No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
CLN3-002ENST000005638743081No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CLN3-021ENST000005684521445No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CLN3-023ENST000005616891286No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CLN3-022ENST000005680761228No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CLN3-013ENST000005660831182No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CLN3-004ENST000005645741159No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CLN3-003ENST000005668241009No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CLN3-033ENST00000565354759No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 11 Coding exons: 5 Transcript length: 931 bps Translation length: 105 residues

Ensembl version

ENST00000566057.1

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000430948 (version 1)

Transcript-based displays