Description

Fanconi anemia, complementation group A [Source:HGNC Symbol;Acc:3582]

Location
Gene

This transcript is a product of gene ENSG00000187741

This gene has 32 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
FANCA-001ENST000003893015451ENSP000003739521455Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS32515YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
FANCA-002ENST000005683694601ENSP000004568291424Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS67099YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
FANCA-003ENST000003893021641ENSP00000373953297Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS42221YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
FANCA-006ENST000005636731694ENSP00000456443316Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
FANCA-201ENST000005349921088ENSP00000443675302Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
FANCA-004ENST000005437361000ENSP00000443409265Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
FANCA-028ENST00000564475732ENSP00000454977240Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
FANCA-026ENST00000567879713ENSP00000457006214Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
FANCA-027ENST00000561722696ENSP00000456608195Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
FANCA-030ENST00000564870460ENSP00000456481153Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
FANCA-021ENST00000567988915ENSP00000454217109Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-010ENST00000567943860ENSP00000455941158Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
FANCA-012ENST00000565582812ENSP00000456722210Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-022ENST00000561660762ENSP00000456588182Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-023ENST00000568626727ENSP00000455974168Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-019ENST00000563510633ENSP0000045699351Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-013ENST00000567621618ENSP00000456762125Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-020ENST00000563318605ENSP0000045797077Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-011ENST00000563513571ENSP00000455946114Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
FANCA-016ENST00000567510461ENSP00000455969101Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-008ENST00000567205413ENSP0000045702763Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-007ENST00000566409395ENSP0000045764741Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
FANCA-031ENST00000567284479No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
FANCA-005ENST000005668892201No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
FANCA-009ENST000003056991430No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
FANCA-024ENST00000564969850No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
FANCA-014ENST00000566133761No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
FANCA-029ENST00000562424745No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
FANCA-025ENST00000568983726No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
FANCA-032ENST00000567883650No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
FANCA-017ENST00000563767578No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
FANCA-018ENST00000561667528No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 43 Coding exons: 43 Transcript length: 5,451 bps Translation length: 1,455 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32515

Ensembl version

ENST00000389301.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000421927 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays