Description

Fanconi anemia, complementation group A [Source:HGNC Symbol;Acc:HGNC:3582]

Synonyms

FA-H, FAA, FACA, FAH, FANCH

Location
Gene

This transcript is a product of gene ENSG00000187741

This gene has 32 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
FANCA-001ENST000003893015451 bp1455 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32515H3BT53 O15360 NM_000135
NP_000126
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-002ENST000005683694601 bp1424 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS67099H3BT53 O15360 NM_001286167
NP_001273096
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-003ENST000003893021641 bp297 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42221O15360 NM_001018112
NP_001018122
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-006ENST000005636731694 bp316 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BRX3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-201ENST000005349921088 bp302 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H8D5 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-004ENST000005437361000 bp265 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q0VAP4 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-028ENST00000564475732 bp240 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-026ENST00000567879713 bp214 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BT40 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-027ENST00000561722696 bp195 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BSA3 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-030ENST00000564870460 bp153 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
FANCA-021ENST00000567988915 bp109 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-010ENST00000567943860 bp158 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BQU1 -
FANCA-012ENST00000565582812 bp210 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BSI9 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-022ENST00000561660762 bp182 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-023ENST00000568626727 bp168 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-019ENST00000563510633 bp51 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-013ENST00000567621618 bp125 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-020ENST00000563318605 bp77 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-011ENST00000563513571 bp114 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BQU6 -
FANCA-016ENST00000567510461 bp101 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BQW7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-008ENST00000567205413 bp63 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BT53 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-007ENST00000566409395 bp41 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-031ENST00000567284479 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
FANCA-005ENST000005668892201 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-009ENST000003056991430 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-024ENST00000564969850 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-014ENST00000566133761 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-029ENST00000562424745 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-025ENST00000568983726 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-032ENST00000567883650 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-017ENST00000563767578 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-018ENST00000561667528 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 6 Coding exons: 6 Transcript length: 732 bps Translation length: 240 residues

Ensembl version

ENST00000564475.2

Type

Putative protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays