Description

Fanconi anemia, complementation group A [Source:HGNC Symbol;Acc:HGNC:3582]

Synonyms

FA-H, FAA, FACA, FAH, FANCH

Location
Gene

This transcript is a product of gene ENSG00000187741

This gene has 32 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
FANCA-001ENST000003893015451 bp1455 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32515H3BT53 O15360 NM_000135
NP_000126
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-002ENST000005683694601 bp1424 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS67099H3BT53 O15360 NM_001286167
NP_001273096
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-003ENST000003893021641 bp297 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42221O15360 NM_001018112
NP_001018122
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-006ENST000005636731694 bp316 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BRX3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-201ENST000005349921088 bp302 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H8D5 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-004ENST000005437361000 bp265 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q0VAP4 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FANCA-028ENST00000564475732 bp240 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-026ENST00000567879713 bp214 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BT40 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-027ENST00000561722696 bp195 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BSA3 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-030ENST00000564870460 bp153 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
FANCA-021ENST00000567988915 bp109 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-010ENST00000567943860 bp158 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BQU1 -
FANCA-012ENST00000565582812 bp210 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BSI9 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-022ENST00000561660762 bp182 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-023ENST00000568626727 bp168 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-019ENST00000563510633 bp51 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-013ENST00000567621618 bp125 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-020ENST00000563318605 bp77 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-011ENST00000563513571 bp114 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BQU6 -
FANCA-016ENST00000567510461 bp101 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BQW7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-008ENST00000567205413 bp63 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BT53 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-007ENST00000566409395 bp41 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
FANCA-031ENST00000567284479 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
FANCA-005ENST000005668892201 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-009ENST000003056991430 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-024ENST00000564969850 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-014ENST00000566133761 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-029ENST00000562424745 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-025ENST00000568983726 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-032ENST00000567883650 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-017ENST00000563767578 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
FANCA-018ENST00000561667528 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 43 Coding exons: 43 Transcript length: 4,601 bps Translation length: 1,424 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS67099

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15360

Ensembl version

ENST00000568369.2

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays