Description

intraflagellar transport 140 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:HGNC:29077]

Synonyms

gs114, KIAA0590, WDTC2

Location
Gene

This transcript is a product of gene ENSG00000187535

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
IFT140-001ENST000004265085270 bp1462 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10439H3BNC5 H3BTA5 Q96RY7
Q9UG52
NM_014714
NP_055529
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
IFT140-006ENST000003613392987 bp656 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9UG52 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
IFT140-007ENST00000569646643 bp121 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BNC5 H3BTA5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
IFT140-012ENST00000569812452 bp113 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BTA5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
IFT140-011ENST00000568837414 bp125 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L0Y8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
IFT140-002ENST000003974174023 bp206 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3KPW0 -
IFT140-003ENST000004399872580 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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IFT140-005ENST000005652984727 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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IFT140-009ENST00000561954826 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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IFT140-010ENST00000566818722 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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IFT140-008ENST00000566052544 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 4 Coding exons: 0 Transcript length: 722 bps

Ensembl version

ENST00000566818.1

Type

Known retained intron

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays