Description

POU class 3 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9214]

Synonyms

OCT6, OTF6, SCIP

Location
About this transcript

This transcript has 1 exon, is annotated with 24 domains and features, is associated with 52 variations and maps to 29 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
POU3F1-001ENST000003730122968451aaENSP00000362103
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30679Q03052 NM_002699
NP_002690
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 1 Coding exons: 1 Transcript length: 2,968 bps Translation length: 451 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS30679

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q03052

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000373012.3

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays