Description

protein S (alpha) [Source:HGNC Symbol;Acc:HGNC:9456]

Synonyms

PROS

Location
Gene

This transcript is a product of gene ENSG00000184500

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
PROS1-001ENST000003942363560676 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2923B4E1L6 C9K0R0 G5E9F8
P07225 Q06F35 Q6J1N0
Q8IXD2 Q8IXD4 Q8IXD5
NM_000313
NP_000304
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
PROS1-002ENST000004074333335545 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B4E1L6 C9K0R0 G5E9F8
Q06F35 Q8IXD2 Q8IXD4
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PROS1-003ENST00000348974806231 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9K0R0 H7BXT0 Q6J1N0
Q8IXD5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PROS1-004ENST0000047268456256 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9K0R0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PROS1-005ENST00000488658643No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 6 Coding exons: 2 Transcript length: 562 bps Translation length: 56 residues

Transcript Support Level

5

Ensembl version

ENST00000472684.1

Type

Putative protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays