Description

protein S (alpha) [Source:HGNC Symbol;Acc:HGNC:9456]

Synonyms

PROS

Location
Gene

This transcript is a product of gene ENSG00000184500

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
PROS1-001ENST000003942363560676 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2923B4E1L6 C9K0R0 G5E9F8
P07225 Q06F35 Q6J1N0
Q8IXD2 Q8IXD4 Q8IXD5
NM_000313
NP_000304
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PROS1-002ENST000004074333335545 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B4E1L6 C9K0R0 G5E9F8
Q06F35 Q8IXD2 Q8IXD4
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PROS1-003ENST00000348974806231 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9K0R0 H7BXT0 Q6J1N0
Q8IXD5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PROS1-004ENST0000047268456256 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9K0R0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PROS1-005ENST00000488658643No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 15 Coding exons: 15 Transcript length: 3,560 bps Translation length: 676 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2923

Uniprot

This transcript corresponds to the following Uniprot identifiers: P07225

Transcript Support Level

1

Ensembl version

ENST00000394236.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays