Description

collagen, type XVIII, alpha 1 [Source:HGNC Symbol;Acc:2195]

Location
Gene

This transcript is a product of gene ENSG00000182871

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
COL18A1-001ENST000003554805924ENSP000003476651519Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS42972YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL18A1-002ENST000004003375436ENSP000003831911339Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS42971YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL18A1-201ENST000003597596607ENSP000003527981754Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL18A1-003ENST000003422203386ENSP00000339118687Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
COL18A1-005ENST00000423214839ENSP00000415692280Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
COL18A1-006ENST00000459895588No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL18A1-004ENST000004732122515No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 42 Coding exons: 42 Transcript length: 5,436 bps Translation length: 1,339 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS42971

Ensembl version

ENST00000400337.2

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000206828 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays