Description

collagen, type XVIII, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2195]

Synonyms

KNO, KNO1, KS

Location
About this transcript

This transcript has 42 exons, is annotated with 39 domains and features, is associated with 718 variations and maps to 71 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
COL18A1-201ENST0000035975965861754aaENSP00000352798
 
Protein coding
CCDS77643P39060 NM_130444
NP_569711
TSL:5GENCODE basicAPPRIS P1
COL18A1-001ENST0000035548059241519aaENSP00000347665
 
Protein coding
CCDS42972P39060 NM_030582
NP_085059
TSL:1GENCODE basic
COL18A1-002ENST0000040033754361339aaENSP00000383191
 
Protein coding
CCDS42971P39060 NM_130445
NP_569712
TSL:1GENCODE basic
COL18A1-003ENST000003422203386687aaENSP00000339118
 
Protein coding
-H7BXV5 -CDS 5' incompleteTSL:2
COL18A1-005ENST00000423214839280aaENSP00000415692
 
Protein coding
-H7C457 -CDS 5' and 3' incompleteTSL:5
COL18A1-006ENST00000459895588No protein-
 
Processed transcript
---TSL:3
COL18A1-004ENST000004732122515No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 42 Coding exons: 42 Transcript length: 5,436 bps Translation length: 1,339 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS42971

Uniprot

This transcript corresponds to the following Uniprot identifiers: P39060

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000400337.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays