Description

collagen, type XVIII, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2195]

Synonyms

KNO, KNO1, KS

Location
Gene

This transcript is a product of gene ENSG00000182871

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
COL18A1-001ENST000003554805924 bp1519 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42972D3DSM5 P39060 NM_030582
NP_085059
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL18A1-002ENST000004003375436 bp1339 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42971D3DSM4 P39060 NM_130445
NP_569712
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL18A1-201ENST000003597596586 bp1754 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P39060 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL18A1-003ENST000003422203386 bp687 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7BXV5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
COL18A1-005ENST00000423214839 bp280 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
COL18A1-006ENST00000459895588 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
COL18A1-004ENST000004732122515 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 42 Coding exons: 42 Transcript length: 5,436 bps Translation length: 1,339 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS42971

Uniprot

This transcript corresponds to the following Uniprot identifiers: P39060

Ensembl version

ENST00000400337.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays