Human (GRCh38.p14)
Description

major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:HGNC:4944]

Gene Synonyms

CELIAC1, HLA-DQB, IDDM1

Location
About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 10572 variant alleles and maps to 800 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000434651.7HLA-DQB1-2051605261aaENSP00000407332.2
 
Protein coding
CCDS43451Q5Y7D6 NM_002123.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:NA
ENST00000399084.5HLA-DQB1-2041734261aaENSP00000382034.1
 
Protein coding
CCDS43451Q5Y7D6 -GENCODE basicAPPRIS P2TSL:NA
ENST00000374943.8HLA-DQB1-2011656269aaENSP00000364080.4
 
Protein coding
CCDS59006Q5SU54 -GENCODE basicAPPRIS ALT2TSL:NA
ENST00000399079.7HLA-DQB1-2021501224aaENSP00000382029.3
 
Protein coding
A2AAZ0 -GENCODE basicTSL:NA
ENST00000399082.7HLA-DQB1-2031219134aaENSP00000382032.3
 
Protein coding
A2AAY8 -GENCODE basicTSL:NA
ENST00000484729.2HLA-DQB1-208783136aaENSP00000436686.1
 
Nonsense mediated decay
E9PIB1 -TSL:NA
ENST00000460185.1HLA-DQB1-207428No protein-
 
Protein coding CDS not defined
--TSL:NA
ENST00000443574.1HLA-DQB1-206309No protein-
 
Protein coding CDS not defined
--TSL:NA
ENST00000487676.1HLA-DQB1-2094644No protein-
 
Retained intron
--TSL:NA
Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,605 bps, Translation length: 261 residues

MANE

This MANE Select transcript contains ENSP00000407332 and matches to NM_002123.5 and NP_002114.3

CCDS

This transcript is a member of the Human CCDS set: CCDS43451

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000434651.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.