Description

5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled [Source:HGNC Symbol;Acc:HGNC:5286]

Synonyms

5-HT1A, ADRB2RL1, ADRBRL1

Location
About this transcript

This transcript has 1 exon, is annotated with 36 domains and features, is associated with 267 variations and maps to 9 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HTR1A-001ENST000003238651778422aaENSP00000316244
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34168P08908 Q5ZGX3 NM_000524
NP_000515
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
HTR1A-003ENST0000050659855342aaENSP00000423433
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RA34 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 1 Coding exons: 1 Transcript length: 1,778 bps Translation length: 422 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34168

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08908

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000323865.4

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays