Description

5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled [Source:HGNC Symbol;Acc:HGNC:5286]

Synonyms

5-HT1A, ADRB2RL1, ADRBRL1

Location
About this transcript

This transcript has 1 exon, is annotated with 36 domains and features, is associated with 278 variations and maps to 18 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HTR1A-001ENST000003238651778422aaENSP00000316244
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34168P08908 Q5ZGX3 NM_000524
NP_000515
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

HTR1A-003ENST0000050659855342aaENSP00000423433
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RA34 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 1 Coding exons: 1 Transcript length: 1,778 bps Translation length: 422 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34168

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08908

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000323865.4

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays