Description

melanoma antigen family F1 [Source:HGNC Symbol;Acc:HGNC:29639]

About this transcript

This transcript has 1 exon, is annotated with 6 domains and features, is associated with 105 variations and maps to 24 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
MAGEF1-001ENST000003178971636307aaENSP00000315064
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3269Q9HAY2 NM_022149
NP_071432
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 1 Coding exons: 1 Transcript length: 1,636 bps Translation length: 307 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3269

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HAY2

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000317897.4

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays