Description

brain-derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:1033]

Synonyms

Location
Gene

This transcript is a product of gene ENSG00000176697

This gene has 19 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
BDNF-016ENST000005255284766 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_170735
NP_733931
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-015ENST000004394764532 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143816
NP_001137288
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-018ENST000003149154340 bp255 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7865P23560 Q6T2C9 Q969N8
Q96TC2 S5MI63
NM_170731
NP_733927
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-202ENST000004207944176 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143811
NP_001137283
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-011ENST000004182124125 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143814
NP_001137286
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-002ENST000003959814071 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_170732
NP_733928
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-008ENST000004389294059 bp329 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44558P23560 Q969N8 Q96TC2
S5MI63
NM_001143810
NP_001137282
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-201ENST000003959804030 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_170733
NP_733929
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-010ENST000003566604018 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001709
NP_001700
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-012ENST000005332464000 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143813
NP_001137285
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-003ENST000003959783988 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143806
NP_001137278
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-013ENST000003959863979 bp262 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41628P23560 Q304R1 Q969N8
Q96TC2 S5MI63
NM_170734
NP_733930
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-004ENST000005329973930 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143807
NP_001137279
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-009ENST000005308613918 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143812
NP_001137284
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-014ENST000005331313878 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-001ENST000005259503829 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143805
NP_001137277
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-007ENST000003959833776 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143808
NM_001143809
NP_001137280
NP_001137281
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-006ENST000005307864176 bp77 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PMP3 -
BDNF-005ENST000005840494030 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Statistics

Exons: 2 Coding exons: 1 Transcript length: 3,829 bps Translation length: 247 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7866

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23560

Ensembl version

ENST00000525950.2

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays