Description

brain-derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:1033]

Synonyms

Location
Gene

This transcript is a product of gene ENSG00000176697

This gene has 19 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
BDNF-016ENST000005255284766 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_170735
NP_733931
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-015ENST000004394764532 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143816
NP_001137288
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-018ENST000003149154340 bp255 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7865P23560 Q6T2C9 Q969N8
Q96TC2 S5MI63
NM_170731
NP_733927
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-202ENST000004207944176 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143811
NP_001137283
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-011ENST000004182124125 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143814
NP_001137286
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-002ENST000003959814071 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_170732
NP_733928
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-008ENST000004389294059 bp329 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44558P23560 Q969N8 Q96TC2
S5MI63
NM_001143810
NP_001137282
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-201ENST000003959804030 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_170733
NP_733929
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-010ENST000003566604018 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001709
NP_001700
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-012ENST000005332464000 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143813
NP_001137285
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-003ENST000003959783988 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143806
NP_001137278
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-013ENST000003959863979 bp262 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41628P23560 Q304R1 Q969N8
Q96TC2 S5MI63
NM_170734
NP_733930
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-004ENST000005329973930 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143807
NP_001137279
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-009ENST000005308613918 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143812
NP_001137284
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-014ENST000005331313878 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-001ENST000005259503829 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143805
NP_001137277
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-007ENST000003959833776 bp247 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7866P23560 Q969N8 Q96TC2
S5MI63
NM_001143808
NM_001143809
NP_001137280
NP_001137281
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BDNF-006ENST000005307864176 bp77 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PMP3 -
BDNF-005ENST000005840494030 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Statistics

Exons: 2 Coding exons: 1 Transcript length: 3,930 bps Translation length: 247 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7866

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23560

Ensembl version

ENST00000532997.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays