Description

brain-derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:1033]

Location
About this transcript

This transcript has 2 exons, is annotated with 20 domains and features, is associated with 151 variations and maps to 40 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
BDNF-016ENST000005255284766247aaENSP00000437138
 
Protein coding
CCDS7866P23560 NM_170735
NP_733931
TSL:NAGENCODE basicAPPRIS P1
BDNF-015ENST000004394764532247aaENSP00000389345
 
Protein coding
CCDS7866P23560 NM_001143816
NP_001137288
TSL:1GENCODE basicAPPRIS P1
BDNF-018ENST000003149154340255aaENSP00000320002
 
Protein coding
CCDS7865P23560 NM_170731
NP_733927
TSL:1GENCODE basic
BDNF-202ENST000004207944176247aaENSP00000389564
 
Protein coding
CCDS7866P23560 NM_001143811
NP_001137283
TSL:1GENCODE basicAPPRIS P1
BDNF-011ENST000004182124125247aaENSP00000400502
 
Protein coding
CCDS7866P23560 NM_001143814
NP_001137286
TSL:1GENCODE basicAPPRIS P1
BDNF-002ENST000003959814071247aaENSP00000379305
 
Protein coding
CCDS7866P23560 NM_170732
NP_733928
TSL:1GENCODE basicAPPRIS P1
BDNF-008ENST000004389294059329aaENSP00000414303
 
Protein coding
CCDS44558P23560 NM_001143810
NP_001137282
TSL:1GENCODE basic
BDNF-201ENST000003959804030247aaENSP00000379304
 
Protein coding
CCDS7866P23560 NM_170733
NP_733929
TSL:1GENCODE basicAPPRIS P1
BDNF-010ENST000003566604018247aaENSP00000349084
 
Protein coding
CCDS7866P23560 NM_001709
NP_001700
TSL:1GENCODE basicAPPRIS P1
BDNF-012ENST000005332464000247aaENSP00000432376
 
Protein coding
CCDS7866P23560 NM_001143813
NP_001137285
TSL:1GENCODE basicAPPRIS P1
BDNF-003ENST000003959783988247aaENSP00000379302
 
Protein coding
CCDS7866P23560 NM_001143806
NP_001137278
TSL:1GENCODE basicAPPRIS P1
BDNF-013ENST000003959863979262aaENSP00000379309
 
Protein coding
CCDS41628P23560 NM_170734
NP_733930
TSL:1GENCODE basic
BDNF-004ENST000005329973930247aaENSP00000435805
 
Protein coding
CCDS7866P23560 NM_001143807
NP_001137279
TSL:1GENCODE basicAPPRIS P1
BDNF-009ENST000005308613918247aaENSP00000435564
 
Protein coding
CCDS7866P23560 NM_001143812
NP_001137284
TSL:1GENCODE basicAPPRIS P1
BDNF-014ENST000005331313878247aaENSP00000432727
 
Protein coding
CCDS7866P23560 -TSL:1GENCODE basicAPPRIS P1
BDNF-001ENST000005259503829247aaENSP00000432035
 
Protein coding
CCDS7866P23560 NM_001143805
NP_001137277
TSL:1GENCODE basicAPPRIS P1
BDNF-007ENST000003959833776247aaENSP00000379307
 
Protein coding
CCDS7866P23560 NM_001143808
NM_001143809
NP_001137280
NP_001137281
TSL:1GENCODE basicAPPRIS P1
BDNF-006ENST00000530786417677aaENSP00000433003
 
Nonsense mediated decay
-E9PMP3 -TSL:1
BDNF-005ENST000005840494030No protein-
 
Processed transcript
---TSL:1
Statistics

Exons: 2 Coding exons: 1 Transcript length: 4,000 bps Translation length: 247 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7866

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23560

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000533246.5

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays