Description

forkhead box G1 [Source:HGNC Symbol;Acc:HGNC:3811]

Synonyms

BF1, FKH2, FKHL1, FKHL2, FKHL3, FKHL4, FOXG1A, FOXG1B, FOXG1C, HBF-3, HFK1, HFK2, HFK3, QIN

Location
About this transcript

This transcript has 1 exon, is annotated with 19 domains and features, is associated with 212 variations and maps to 42 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
FOXG1-001ENST000003130714890489aaENSP00000339004
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9636P55316 NM_005249
NP_005240
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 1 Coding exons: 1 Transcript length: 4,890 bps Translation length: 489 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9636

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55316

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000313071.6

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays