Description

desmoglein 4 [Source:HGNC Symbol;Acc:HGNC:21307]

Synonyms

CDHF13, LAH

Location
About this transcript

This transcript has 15 exons, is annotated with 38 domains and features, is associated with 722 variations and maps to 9 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
DSG4-002ENST0000035974745261059aaENSP00000352785
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45845Q86SJ6 NM_001134453
NP_001127925
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DSG4-001ENST0000030812835791040aaENSP00000311859
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11897Q86SJ6 NM_177986
NP_817123
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 15 Coding exons: 15 Transcript length: 4,526 bps Translation length: 1,059 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45845

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86SJ6

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000359747.4

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays