Description

desmoglein 4 [Source:HGNC Symbol;Acc:HGNC:21307]

Synonyms

CDHF13, LAH

Location
About this transcript

This transcript has 15 exons, is annotated with 38 domains and features, is associated with 760 variations and maps to 34 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
DSG4-002ENST0000035974745261059aaENSP00000352785
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45845Q86SJ6 NM_001134453
NP_001127925
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DSG4-001ENST0000030812835791040aaENSP00000311859
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11897Q86SJ6 NM_177986
NP_817123
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 15 Coding exons: 15 Transcript length: 4,526 bps Translation length: 1,059 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45845

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86SJ6

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000359747.4

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays