Description

ataxia telangiectasia and Rad3 related [Source:HGNC Symbol;Acc:HGNC:882]

Synonyms

FRP1, MEC1, SCKL, SCKL1

Gene

This transcript is a product of gene ENSG00000175054

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
ATR-001ENST000003507218249 bp2644 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3124Q13535 NM_001184
NP_001175
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATR-002ENST000005132915190 bp457 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATR-005ENST00000515149929 bp309 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RIG7 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATR-003ENST00000507148724 bp100 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RFJ6 -
ATR-013ENST00000504521718 bp80 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0Y8Y6 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATR-014ENST00000515810553 bp39 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0Y8R8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATR-008ENST00000514393552 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATR-007ENST00000507620837 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATR-010ENST00000511016681 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATR-011ENST00000515863641 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 2 Coding exons: 0 Transcript length: 681 bps

Ensembl version

ENST00000511016.1

Type

Known retained intron

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays