Description

serum amyloid A1 [Source:HGNC Symbol;Acc:HGNC:10513]

Synonyms

PIG4, SAA, TP53I4

Location
Gene

This transcript is a product of gene ENSG00000173432

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
SAA1-003ENST00000405158675122 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7835E9PQD6 P0DJI8 NM_000331
NP_000322
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SAA1-001ENST00000356524615122 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7835E9PQD6 P0DJI8 NM_199161
NP_954630
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SAA1-002ENST00000532858583122 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7835E9PQD6 NM_001178006
NP_001171477
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 4 Coding exons: 3 Transcript length: 675 bps Translation length: 122 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7835

Uniprot

This transcript corresponds to the following Uniprot identifiers: P0DJI8

Transcript Support Level

5

Ensembl version

ENST00000405158.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays