Description

zinc finger protein 217 [Source:HGNC Symbol;Acc:HGNC:13009]

Synonyms

ZABC1

Location
Gene

This transcript is a product of gene ENSG00000171940

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
ZNF217-001ENST0000037147157961048 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13443A2A326 O75362 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
ZNF217-201ENST0000030234256331048 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13443A2A326 O75362 NM_006526
NP_006517
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
ZNF217-004ENST0000043168777995 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2A326 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ZNF217-002ENST00000437222746149 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9BZ31 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ZNF217-003ENST00000540425568No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 5 Coding exons: 4 Transcript length: 5,633 bps Translation length: 1,048 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13443

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75362

Transcript Support Level

1

Ensembl version

ENST00000302342.3

Type

Known protein coding

Prediction Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays