Description

metallothionein 1B [Source:HGNC Symbol;Acc:HGNC:7394]

Synonyms

MT1, MT1Q

Location
About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 22 variations and maps to 9 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
MT1B-001ENST0000033434638061aaENSP00000334998
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10765P07438 NM_005947
NP_005938
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
MT1B-002ENST0000056239935170aaENSP00000456056
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BR34 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 3 Coding exons: 3 Transcript length: 380 bps Translation length: 61 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10765

Uniprot

This transcript corresponds to the following Uniprot identifiers: P07438

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000334346.2

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays