Description

methyl CpG binding protein 2 (Rett syndrome) [Source:HGNC Symbol;Acc:HGNC:6990]

Synonyms

MRX16, MRX79, RTT

Gene

This transcript is a product of gene ENSG00000169057

This gene has 14 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
MECP2-001ENST0000030339110505 bp486 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14741C9JH89 D3YJ43 P51608
NM_004992
NP_004983
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MECP2-002ENST000004539601685 bp498 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48193P51608 NM_001110792
NP_001104262
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MECP2-202ENST0000061973210237 bp509 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JH89 E9LUH4 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MECP2-203ENST000006224331071 bp324 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C6KG44 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MECP2-005ENST00000407218892 bp172 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B5MCB4 C9JH89 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MECP2-201ENST00000611468603 bp168 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D5L9I4 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MECP2-008ENST00000415944414 bp50 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JH89 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MECP2-003ENST00000369957784 bp34 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
MECP2-012ENST000004602271299 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MECP2-010ENST000004882931200 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MECP2-011ENST000004636441089 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MECP2-004ENST00000486506875 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MECP2-013ENST00000481807436 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MECP2-006ENST00000496908351 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Statistics

Exons: 3 Coding exons: 3 Transcript length: 1,685 bps Translation length: 498 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS48193

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51608

Ensembl version

ENST00000453960.3

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays