Description

surfactant protein C [Source:HGNC Symbol;Acc:HGNC:10802]

Synonyms

BRICD6, PSP-C, SFTP2, SMDP2, SP-C

Location
About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 121 variations and maps to 39 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SFTPC-003ENST000005213151046191aaENSP00000430410
 
Protein coding
CCDS55209A0A0A0MTC9 NM_001172357
NP_001165828
TSL:1GENCODE basicAPPRIS ALT1
SFTPC-001ENST00000318561997197aaENSP00000316152
 
Protein coding
CCDS43722P11686 NM_001172410
NM_003018
NP_001165881
NP_003009
TSL:1GENCODE basicAPPRIS P3
SFTPC-010ENST00000522109921150aaENSP00000429496
 
Protein coding
-E5RI92 -TSL:2GENCODE basic
SFTPC-011ENST00000437090773161aaENSP00000407931
 
Protein coding
-C9JYF6 -TSL:3GENCODE basic
SFTPC-007ENST00000524255681144aaENSP00000429552
 
Protein coding
-E5RI64 -TSL:2GENCODE basic
SFTPC-006ENST00000520605519155aaENSP00000430266
 
Protein coding
-E5RG20 -TSL:3GENCODE basic
SFTPC-008ENST00000523296395125aaENSP00000429619
 
Protein coding
-E5RHW5 -CDS 3' incompleteTSL:3
SFTPC-014ENST000005228801000No protein-
 
Processed transcript
---TSL:3
SFTPC-005ENST00000524318993No protein-
 
Processed transcript
---TSL:3
SFTPC-013ENST00000524350538No protein-
 
Processed transcript
---TSL:4
SFTPC-009ENST00000518615377No protein-
 
Retained intron
---TSL:2
SFTPC-012ENST00000522630227No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 5 Coding exons: 5 Transcript length: 1,046 bps Translation length: 191 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS55209

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000521315.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays