Description

Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:HGNC Symbol;Acc:15832]

Location
Gene

This transcript is a product of gene ENSG00000168000

This gene has 28 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
BSCL2-201ENST000004330532038ENSP00000414002462Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS44627YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BSCL2-006ENST000004035501693ENSP00000385561398Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS8031YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BSCL2-003ENST000003607961683ENSP00000354032462Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS44627YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BSCL2-005ENST000004070221516ENSP00000384080398Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS8031YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BSCL2-004ENST000004219061440ENSP00000413209398Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS8031YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BSCL2-008ENST000002788931364ENSP00000278893287Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS55769YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BSCL2-001ENST000004058371984ENSP00000385332464Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BSCL2-022ENST00000448568992ENSP00000413340223Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BSCL2-020ENST00000524862865ENSP00000433888226Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BSCL2-023ENST00000531524844ENSP00000436026111Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BSCL2-009ENST00000464544794ENSP0000043178293Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BSCL2-019ENST00000532818662ENSP00000435831123Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BSCL2-024ENST00000533982585ENSP0000043414999Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BSCL2-021ENST00000528874553ENSP0000043699123Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BSCL2-012ENST00000449636545ENSP00000405265150Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
BSCL2-018ENST00000530009539ENSP0000043550028Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BSCL2-027ENST00000403098326ENSP0000038425879Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
BSCL2-025ENST00000525000154ENSP0000043704452Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
BSCL2-002ENST000003017811712ENSP00000301781277Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
BSCL2-010ENST00000413908578ENSP0000039372839Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
BSCL2-029ENST00000537604691No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BSCL2-015ENST00000412351491No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
BSCL2-026ENST00000530900398No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
BSCL2-028ENST00000526426353No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
BSCL2-017ENST00000532115328No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
BSCL2-011ENST00000463679881No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
BSCL2-013ENST00000468505547No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
BSCL2-014ENST00000470529512No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 11 Coding exons: 10 Transcript length: 1,516 bps Translation length: 398 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8031

Ensembl version

ENST00000407022.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000319184 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays