Description

nucleotide-binding oligomerization domain containing 2 [Source:HGNC Symbol;Acc:HGNC:5331]

Synonyms

BLAU, CARD15, CD, CLR16.3, IBD1, NLRC2, PSORAS1

Location
Gene

This transcript is a product of gene ENSG00000167207

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
NOD2-001ENST000003005894486 bp1040 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10746A3FA72 A7J384 A7KZQ9
A7KZR0 B5A7D5 B5B2Z4
B5B2Z5 B5B2Z6 D6CHF9
D9N2T7 E9PK30 Q6TDC3
Q7Z596 Q7Z597 Q9HC29
NM_022162
NP_071445
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NOD2-004ENST00000531674624 bp146 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3FA72 E9PK30 Q6TDC3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
NOD2-010ENST00000534057506 bp169 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B5B2Z5 B5B2Z6 Q7Z596
-CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
NOD2-002ENST000005270701707 bp35 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PLF7 -
NOD2-006ENST00000534067602 bp60 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-B5B2Z5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
NOD2-007ENST00000529633450 bp60 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-B5B2Z5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
NOD2-008ENST00000524712366 bp60 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-B5B2Z5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
NOD2-009ENST00000527052338 bp60 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-B5B2Z5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
NOD2-003ENST000005264171100 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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NOD2-005ENST00000532206878 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Statistics

Exons: 12 Coding exons: 12 Transcript length: 4,486 bps Translation length: 1,040 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10746

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HC29

Ensembl version

ENST00000300589.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays