Description

nucleotide-binding oligomerization domain containing 2 [Source:HGNC Symbol;Acc:HGNC:5331]

Synonyms

BLAU, CARD15, CD, CLR16.3, IBD1, NLRC2, PSORAS1

Location
About this transcript

This transcript has 12 exons, is annotated with 36 domains and features, is associated with 583 variations and maps to 31 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
NOD2-001ENST0000030058944861040aaENSP00000300589
 
Protein coding
CCDS10746Q9HC29 NM_001293557
NM_022162
NP_001280486
NP_071445
TSL:2GENCODE basicAPPRIS P1
NOD2-004ENST00000531674624146aaENSP00000431681
 
Protein coding
-E9PK30 -CDS 3' incompleteTSL:1
NOD2-010ENST00000534057506169aaENSP00000437246
 
Protein coding
-H0YF53 -CDS 5' and 3' incompleteTSL:1
NOD2-002ENST00000527070170735aaENSP00000435149
 
Nonsense mediated decay
-E9PLF7 -TSL:1
NOD2-006ENST0000053406760260aaENSP00000463145
 
Nonsense mediated decay
-J3QL80 -CDS 5' incompleteTSL:1
NOD2-007ENST0000052963345060aaENSP00000462443
 
Nonsense mediated decay
-J3QL80 -CDS 5' incompleteTSL:1
NOD2-008ENST0000052471236660aaENSP00000464065
 
Nonsense mediated decay
-J3QL80 -CDS 5' incompleteTSL:1
NOD2-009ENST0000052705233860aaENSP00000463423
 
Nonsense mediated decay
-J3QL80 -CDS 5' incompleteTSL:1
NOD2-003ENST000005264171100No protein-
 
Processed transcript
---TSL:1
NOD2-005ENST00000532206878No protein-
 
Processed transcript
---TSL:1
Statistics

Exons: 12 Coding exons: 12 Transcript length: 4,486 bps Translation length: 1,040 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10746

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HC29

Transcript Support Level (TSL)

TSL:2

Ensembl version

ENST00000300589.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays