Description

paired related homeobox 2 [Source:HGNC Symbol;Acc:HGNC:21338]

Synonyms

PMX2, PRX2

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 62 variations and maps to 22 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PRRX2-001ENST000003724691311253aaENSP00000361547
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6926Q99811 NM_016307
NP_057391
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 4 Coding exons: 4 Transcript length: 1,311 bps Translation length: 253 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6926

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99811

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000372469.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays