Description

sphingomyelin phosphodiesterase 1, acid lysosomal [Source:HGNC Symbol;Acc:11120]

Location
Gene

This transcript is a product of gene ENSG00000166311

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
SMPD1-001ENST000003422452452ENSP00000340409631Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS44531YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SMPD1-008ENST000005272752188ENSP00000435350630Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31409YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SMPD1-201ENST000002993972326ENSP00000299397587Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SMPD1-202ENST000003567612290ENSP00000349203575Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SMPD1-004ENST000005262801344ENSP00000436278317Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
SMPD1-009ENST00000530395447ENSP0000043147953Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SMPD1-007ENST000005344052446ENSP00000434353402Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
SMPD1-002ENST000005331232211ENSP00000435950366Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
SMPD1-003ENST000005313031451ENSP00000432625171Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
SMPD1-010ENST00000533196425No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SMPD1-006ENST00000531336650No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
SMPD1-005ENST00000532367409No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 6 Coding exons: 6 Transcript length: 2,452 bps Translation length: 631 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS44531

Ensembl version

ENST00000342245.4

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000384205 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays