Description

sphingomyelin phosphodiesterase 1, acid lysosomal [Source:HGNC Symbol;Acc:HGNC:11120]

Synonyms

ASM

Location
About this transcript

This transcript has 5 exons, is associated with 296 variations and maps to 24 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SMPD1-001ENST000003422452452631aaENSP00000340409
 
Protein coding
CCDS44531P17405 NM_000543
NP_000534
TSL:1GENCODE basicAPPRIS ALT1
SMPD1-008ENST000005272752188630aaENSP00000435350
 
Protein coding
CCDS31409P17405 NM_001007593
NP_001007594
TSL:2GENCODE basicAPPRIS P3
SMPD1-004ENST000005262801344317aaENSP00000436278
 
Protein coding
-H0YEP5 -CDS 5' incompleteTSL:1
SMPD1-009ENST0000053039544753aaENSP00000431479
 
Protein coding
-E9PL59 -CDS 3' incompleteTSL:5
SMPD1-007ENST000005344052446402aaENSP00000434353
 
Nonsense mediated decay
-E9PQT3 -TSL:1
SMPD1-002ENST000005331232211366aaENSP00000435950
 
Nonsense mediated decay
-G3V1E1 -TSL:2
SMPD1-003ENST000005313031451171aaENSP00000432625
 
Nonsense mediated decay
-E9PPK6 -TSL:2
SMPD1-010ENST00000533196425No protein-
 
Processed transcript
---TSL:3
SMPD1-006ENST00000531336650No protein-
 
Retained intron
---TSL:2
SMPD1-005ENST00000532367409No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 5 Coding exons: 3 Transcript length: 2,211 bps Translation length: 366 residues

Transcript Support Level (TSL)

TSL:2

Ensembl version

ENST00000533123.5

Type

Known nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays