Description

sprouty-related, EVH1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20249]

Synonyms

FLJ33903, PPP1R147

Location
About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 198 variations and maps to 43 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SPRED1-001ENST000002990847780444aaENSP00000299084
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32193Q7Z699 NM_152594
NP_689807
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

SPRED1-003ENST00000561317527131aaENSP00000453680
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YMN8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SPRED1-004ENST000005612051177No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 7 Coding exons: 7 Transcript length: 7,780 bps Translation length: 444 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32193

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z699

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000299084.7

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays