Description

sprouty-related, EVH1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20249]

Synonyms

FLJ33903, PPP1R147

Location
About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 175 variations and maps to 20 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SPRED1-001ENST000002990847780444aaENSP00000299084
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32193Q7Z699 NM_152594
NP_689807
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SPRED1-003ENST00000561317527131aaENSP00000453680
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YMN8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SPRED1-004ENST000005612051177No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 7 Coding exons: 7 Transcript length: 7,780 bps Translation length: 444 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32193

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z699

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000299084.7

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays