Description

orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:8522]

Location
Gene

This transcript is a product of gene ENSG00000165588

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
OTX2-001ENST000003394752199ENSP00000343819297Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS9728YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
OTX2-002ENST000005550061279ENSP00000452336289Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS41960YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
OTX2-007ENST000004089901082ENSP00000386185289Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS41960YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
OTX2-006ENST00000554845908ENSP00000451357239Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
OTX2-005ENST00000554788835ENSP0000047448635Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
OTX2-003ENST00000555804797ENSP00000451272163Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
OTX2-004ENST00000554559715ENSP0000045046835Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
Statistics

Exons: 3 Coding exons: 3 Transcript length: 1,082 bps Translation length: 289 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS41960

Ensembl version

ENST00000408990.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000411547 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays