Description

orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:HGNC:8522]

Synonyms

Location
Gene

This transcript is a product of gene ENSG00000165588

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
OTX2-001ENST000003394752199 bp297 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9728F1T0D1 G3V3P9 P32243
NM_001270525
NM_021728
NP_001257454
NP_068374
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
OTX2-002ENST000005550061279 bp289 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41960F1T0D0 G3V3J3 P32243
NM_001270523
NM_001270524
NP_001257452
NP_001257453
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
OTX2-007ENST000004089901082 bp289 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41960F1T0D0 G3V3J3 P32243
NM_172337
NP_758840
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
OTX2-006ENST00000554845908 bp239 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V3P9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
OTX2-005ENST00000554788835 bp35 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F1T0C9 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
OTX2-003ENST00000555804797 bp163 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V3J3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
OTX2-004ENST00000554559715 bp35 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F1T0C9 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 2 Coding exons: 2 Transcript length: 835 bps Translation length: 35 residues

Ensembl version

ENST00000554788.2

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays