Description

Werner syndrome, RecQ helicase-like [Source:HGNC Symbol;Acc:HGNC:12791]

Synonyms

RECQ3, RECQL2

Location
About this transcript

This transcript has 35 exons, is annotated with 23 domains and features, is associated with 489 variations and maps to 14 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
WRN-001ENST0000029813952151432aaENSP00000298139
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6082Q14191 NM_000553
NP_000544
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
WRN-002ENST000005216203593No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

WRN-003ENST00000520169629No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 35 Coding exons: 34 Transcript length: 5,215 bps Translation length: 1,432 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6082

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14191

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000298139.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays