Description

ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]

Synonyms

UBAP

Location
Gene

This transcript is a product of gene ENSG00000165006

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
UBAP1-001ENST000002976612735502 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6550Q9NZ09 NM_001171201
NM_001171202
NM_001171203
NM_001171204
NM_016525
NP_001164672
NP_001164673
NP_001164674
NP_001164675
NP_057609
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
UBAP1-002ENST000003595442535502 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6550Q9NZ09 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
UBAP1-003ENST000003791862524441 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9NZ09 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 7 Coding exons: 6 Transcript length: 2,535 bps Translation length: 502 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6550

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZ09

Transcript Support Level

1

Ensembl version

ENST00000359544.2

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays