Human (GRCh38.p14)
Description

RP9 pre-mRNA splicing factor [Source:HGNC Symbol;Acc:HGNC:10288]

Gene Synonyms

PAP-1

Location
About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 6069 variant alleles and maps to 355 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000297157.8RP9-2011135221aaENSP00000297157.3
 
Protein coding
CCDS5440A0A090N8Z0 Q8TA86 NM_203288.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000684207.1RP9-2071656156aaENSP00000506942.1
 
Protein coding
A0A804HI79 -GENCODE basic
ENST00000448915.1RP9-202629166aaENSP00000411577.1
 
Protein coding
C9J6V2 -TSL:3CDS 3' incomplete
ENST00000683432.1RP9-206144551aaENSP00000508174.1
 
Nonsense mediated decay
A0A804HL29 --
ENST00000682645.1RP9-2054155No protein-
 
Retained intron
---
ENST00000474370.2RP9-2033057No protein-
 
Retained intron
--TSL:2
ENST00000492391.2RP9-2042088No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,135 bps, Translation length: 221 residues

MANE

This MANE Select transcript contains ENSP00000297157 and matches to NM_203288.2 and NP_976033.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TA86

CCDS

This transcript is a member of the Human CCDS set: CCDS5440

Transcript Support Level (TSL)

TSL:1

Version

ENST00000297157.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.