Human (GRCh38.p14)
Description

shroom family member 1 [Source:HGNC Symbol;Acc:HGNC:24084]

Gene Synonyms

APXL2, KIAA1960

About this transcript

This transcript has 2 exons, is annotated with 12 domains and features, is associated with 2602 variant alleles and maps to 322 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000378679.8SHROOM1-2033768852aaENSP00000367950.3
 
Protein coding
CCDS54902Q2M3G4-1 NM_001172700.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000617339.4SHROOM1-2083638852aaENSP00000478436.1
 
Protein coding
CCDS54902Q2M3G4-1 -GENCODE basicAPPRIS P2TSL:5
ENST00000319854.7SHROOM1-2013190847aaENSP00000324245.3
 
Protein coding
CCDS4161Q2M3G4-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000378676.1SHROOM1-2022352783aaENSP00000367947.1
 
Protein coding
CCDS93780A6NN40 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000440118.1SHROOM1-2041080324aaENSP00000388049.1
 
Protein coding
C9JXU1 -TSL:2CDS 3' incomplete
ENST00000488072.1SHROOM1-205423No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000495680.2SHROOM1-206281No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000606676.1SHROOM1-207351No protein-
 
Retained intron
--TSL:NA
Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,080 bps, Translation length: 324 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

CDS 3' incomplete

Version

ENST00000440118.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.