Description

hydroxyprostaglandin dehydrogenase 15-(NAD) [Source:HGNC Symbol;Acc:HGNC:5154]

Synonyms

SDR36C1

Gene

This transcript is a product of gene ENSG00000164120

This gene has 14 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
HPGD-001ENST000002965223027 bp266 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3821D6RA66 D6RA83 P15428
Q9NZQ5
NM_000860
NP_000851
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HPGD-201ENST000005419232920 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58933D6RA66 D6RA83 P15428
NM_001256307
NP_001243236
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HPGD-202ENST000005424982786 bp143 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58935P15428 Q9NZQ5 NM_001256305
NP_001243234
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HPGD-002ENST000005109011535 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58933D6RA66 D6RA83 P15428
NM_001256301
NP_001243230
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HPGD-013ENST000002965211171 bp178 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54821P15428 Q9NZQ5 NM_001145816
NP_001139288
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HPGD-011ENST00000422112805 bp198 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58934P15428 Q9NZQ5 NM_001256306
NP_001243235
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HPGD-004ENST000005044331910 bp176 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PBZ2 Q9NZQ5 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HPGD-010ENST00000514584827 bp97 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RA66 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
HPGD-008ENST00000506910819 bp99 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RA66 D6RA83 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
HPGD-005ENST000005108351553 bp37 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RHF8 -
HPGD-003ENST000005083301046 bp87 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PD69 Q9NZQ5 -
HPGD-007ENST00000511499786 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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HPGD-006ENST00000512410666 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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HPGD-009ENST00000509512536 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 5 Coding exons: 5 Transcript length: 805 bps Translation length: 198 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS58934

Uniprot

This transcript corresponds to the following Uniprot identifiers: P15428

Ensembl version

ENST00000422112.3

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays