Description

paired-like homeodomain 2 [Source:HGNC Symbol;Acc:9005]

Gene

This transcript is a product of gene ENSG00000164093

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
PITX2-003ENST000003549253359ENSP00000347004317Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS3692YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PITX2-005ENST000003067322320ENSP00000304169324Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS3694YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PITX2-002ENST000003550802100ENSP00000347192271Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS3693YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PITX2-001ENST000003945981906ENSP00000378097317Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS3692YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PITX2-010ENST000005571191889ENSP00000475617264Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PITX2-004ENST000003945951693ENSP00000378095174Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PITX2-006ENST000005118371085ENSP00000421454290Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PITX2-007ENST00000511990463ENSP00000424142118Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PITX2-008ENST00000556049941No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PITX2-011ENST000006078681398No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 2 Coding exons: 2 Transcript length: 1,889 bps Translation length: 264 residues

Ensembl version

ENST00000557119.2

Type

Putative protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs2278782, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HAPMAP-CHD, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-CEU.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000471127 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays