Description

protein kinase C, delta [Source:HGNC Symbol;Acc:HGNC:9399]

Location
Gene

This transcript is a product of gene ENSG00000163932

This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
PRKCD-001ENST000003947292810676 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2870A0A024R328 B4DFV1 C9J9P1
C9JZU8 Q05655
NM_212539
NP_997704
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PRKCD-002ENST000003304522680676 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2870A0A024R328 B4DFV1 C9J9P1
C9JZU8 Q05655
NM_006254
NP_006245
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PRKCD-006ENST00000464818777223 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J9P1 C9JZU8 C9K0E3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCD-004ENST0000047884358977 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JZU8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCD-005ENST00000487897562125 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J9P1 C9JZU8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCD-003ENST00000477794404No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 19 Coding exons: 17 Transcript length: 2,680 bps Translation length: 676 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2870

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q05655

Transcript Support Level

1

Ensembl version

ENST00000330452.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays