Description

ataxin 7 [Source:HGNC Symbol;Acc:HGNC:10560]

Synonyms

ADCAII, OPCA3, SCA7

Location
Gene

This transcript is a product of gene ENSG00000163635

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
ATXN7-001ENST000002959007224 bp892 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43102F6U365 O15265 Q9UPD8
NM_000333
NP_000324
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN7-201ENST000005380656842 bp945 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54603F6U365 H0YAT6 O15265
Q8TEZ8 Q9UPD8
NM_001177387
NP_001170858
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN7-004ENST000004877173683 bp892 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43102F6U365 O15265 Q9UPD8
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN7-006ENST000004843322741 bp747 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS46861O15265 NM_001128149
NP_001121621
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN7-002ENST00000474513728 bp26 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6U365 Q9UPD8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATXN7-013ENST00000522345346 bp115 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YAT6 Q8TEZ8 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATXN7-011ENST00000488239585 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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ATXN7-003ENST000004741123367 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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ATXN7-005ENST00000475897918 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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ATXN7-007ENST00000466529758 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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ATXN7-008ENST00000477516723 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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ATXN7-010ENST00000484668573 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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ATXN7-009ENST00000472569536 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 9 Coding exons: 9 Transcript length: 2,741 bps Translation length: 747 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS46861

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15265

Ensembl version

ENST00000484332.1

Type

Putative protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays