Human (GRCh38.p14)
Description

protein tyrosine phosphatase non-receptor type 13 [Source:HGNC Symbol;Acc:HGNC:9646]

Gene Synonyms

PTP-BAS, PTP-BL, PTP1E, PTPL1

Location
About this transcript

This transcript has 48 exons, is annotated with 99 domains and features, is associated with 89880 variant alleles and maps to 1610 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000411767.7PTPN13-20285482485aaENSP00000407249.2
 
Protein coding
CCDS47094Q12923-1 NM_080683.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000436978.5PTPN13-20485732490aaENSP00000394794.1
 
Protein coding
CCDS47093Q12923-4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000427191.6PTPN13-20384872466aaENSP00000408368.2
 
Protein coding
CCDS47095Q12923-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000511467.1PTPN13-20980762490aaENSP00000426626.1
 
Protein coding
CCDS47093Q12923-4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000316707.10PTPN13-20175462294aaENSP00000322675.6
 
Protein coding
CCDS47096Q12923-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000502971.5PTPN13-2051708227aaENSP00000423531.1
 
Protein coding
D6R9M4 -GENCODE basicTSL:1
ENST00000507902.5PTPN13-206516139aaENSP00000422835.1
 
Protein coding
D6R9X4 -TSL:4CDS 3' incomplete
ENST00000511105.1PTPN13-208645No protein-
 
Retained intron
--TSL:3
ENST00000508063.1PTPN13-207457No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 48, Coding exons: 47, Transcript length: 8,573 bps, Translation length: 2,490 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12923

CCDS

This transcript is a member of the Human CCDS set: CCDS47093

Transcript Support Level (TSL)

TSL:5

Version

ENST00000436978.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.