Description

collagen, type VI, alpha 3 [Source:HGNC Symbol;Acc:2213]

Gene

This transcript is a product of gene ENSG00000163359

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
COL6A3-001ENST0000029555010749ENSP000002955503177Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS33412YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL6A3-203ENST000003535789963ENSP000003158732971Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS33409YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL6A3-011ENST000004098098916ENSP000003868442971Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS33409YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL6A3-012ENST000004720568628ENSP000004182852570Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS33410YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL6A3-002ENST000003920044037ENSP000003758611237Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS33411YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL6A3-003ENST000003920033464ENSP000003758601036Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS54439YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL6A3-202ENST000003474019978ENSP000003156092976Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL6A3-201ENST000003463589219ENSP000002955462977Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL6A3-008ENST000004337622379ENSP00000389539708Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
COL6A3-004ENST00000491233652ENSP00000460277173Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
COL6A3-005ENST000004732585433No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL6A3-006ENST00000493608742No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
COL6A3-009ENST000004917696731No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL6A3-007ENST00000493475669No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL6A3-010ENST00000468792329No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 41 Coding exons: 40 Transcript length: 8,628 bps Translation length: 2,570 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33410

Ensembl version

ENST00000472056.1

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000353032 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays