Human (GRCh38.p14)
Description

collagen type VI alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2213]

About this transcript

This transcript has 43 exons, is annotated with 105 domains and features, is associated with 41508 variant alleles and maps to 1039 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000295550.9COL6A3-201105323177aaENSP00000295550.4
 
Protein coding
CCDS33412P12111-1 NM_004369.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000353578.9COL6A3-20396362971aaENSP00000315873.4
 
Protein coding
CCDS33409P12111-2 -GENCODE basicTSL:5
ENST00000472056.5COL6A3-20886282570aaENSP00000418285.1
 
Protein coding
CCDS33410P12111-4 -GENCODE basicTSL:1
ENST00000392004.7COL6A3-20540371237aaENSP00000375861.3
 
Protein coding
CCDS33411P12111-5 -GENCODE basicTSL:1
ENST00000392003.6COL6A3-20434641036aaENSP00000375860.2
 
Protein coding
CCDS54439P12111-3 -GENCODE basicTSL:2
ENST00000347401.8COL6A3-2022670638aaENSP00000315609.5
 
Protein coding
E7ENL6 -TSL:5CDS 5' incomplete
ENST00000433762.1COL6A3-2062379708aaENSP00000389539.1
 
Protein coding
C9JNG9 -TSL:1CDS 3' incomplete
ENST00000684597.1COL6A3-220414138aaENSP00000508021.1
 
Protein coding
A0A804HKQ0 -CDS 5' and 3' incomplete
ENST00000682957.1COL6A3-2152416227aaENSP00000507870.1
 
Nonsense mediated decay
A0A804HKC7 -CDS 5' incomplete
ENST00000683348.1COL6A3-218115546aaENSP00000508058.1
 
Nonsense mediated decay
A0A804HKS9 -CDS 5' incomplete
ENST00000683145.1COL6A3-2161154No protein-
 
Protein coding CDS not defined
---
ENST00000491233.1COL6A3-210652No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000682405.1COL6A3-214289No protein-
 
Protein coding CDS not defined
---
ENST00000491769.1COL6A3-2116731No protein-
 
Retained intron
--TSL:5
ENST00000473258.1COL6A3-2095433No protein-
 
Retained intron
--TSL:2
ENST00000684508.1COL6A3-2191341No protein-
 
Retained intron
---
ENST00000683155.1COL6A3-2171211No protein-
 
Retained intron
---
ENST00000493608.1COL6A3-213742No protein-
 
Retained intron
--TSL:2
ENST00000493475.2COL6A3-212669No protein-
 
Retained intron
--TSL:2
ENST00000468792.1COL6A3-207329No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 43, Coding exons: 42, Transcript length: 9,636 bps, Translation length: 2,971 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P12111

CCDS

This transcript is a member of the Human CCDS set: CCDS33409

Transcript Support Level (TSL)

TSL:5

Version

ENST00000353578.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.