Description

collagen, type VI, alpha 3 [Source:HGNC Symbol;Acc:HGNC:2213]

Synonyms

Gene

This transcript is a product of gene ENSG00000163359

This gene has 14 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
COL6A3-001ENST0000029555010749 bp3177 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33412D9ZGF2 P12111 Q8N4Z1
NM_004369
NP_004360
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-202ENST000003535789963 bp2971 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33409P12111 Q8N4Z1 NM_057167
NP_476508
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-011ENST000004098098916 bp2971 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33409P12111 Q8N4Z1 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-012ENST000004720568628 bp2570 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33410P12111 Q8N4Z1 NM_057166
NP_476507
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-002ENST000003920044037 bp1237 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33411P12111 NM_057165
NP_476506
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-003ENST000003920033464 bp1036 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54439P12111 NM_057164
NP_476505
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-201ENST000003474018625 bp2569 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL6A3-008ENST000004337622379 bp708 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JNG9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
COL6A3-004ENST00000491233652 bp173 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L392 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
COL6A3-005ENST000004732585433 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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COL6A3-006ENST00000493608742 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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COL6A3-009ENST000004917696731 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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COL6A3-007ENST00000493475669 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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COL6A3-010ENST00000468792329 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 2 Coding exons: 0 Transcript length: 669 bps

Ensembl version

ENST00000493475.2

Type

Known retained intron

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays