Description

sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]

Synonyms

A170, OSIL, p60, p62, p62B, PDB3

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 194 variations and maps to 40 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SQSTM1-001ENST000003898052986440aaENSP00000374455
 
Protein coding
CCDS34317Q13501 NM_003900
NP_003891
TSL:1GENCODE basicAPPRIS P1
SQSTM1-002ENST000003607182253356aaENSP00000353944
 
Protein coding
CCDS47355Q13501 NM_001142298
NM_001142299
NP_001135770
NP_001135771
TSL:1GENCODE basic
SQSTM1-013ENST000005101871714378aaENSP00000424477
 
Protein coding
-E7EMC7 -TSL:5GENCODE basic
SQSTM1-015ENST00000514093842167aaENSP00000427308
 
Protein coding
-E9PFW8 -CDS 3' incompleteTSL:5
SQSTM1-003ENST00000422245628140aaENSP00000394534
 
Protein coding
-C9JRJ8 -CDS 3' incompleteTSL:4
SQSTM1-017ENST00000504627602190aaENSP00000425957
 
Protein coding
-E3W990 -CDS 3' incompleteTSL:5
SQSTM1-201ENST0000062666027473aaENSP00000487071
 
Protein coding
---TSL:5GENCODE basic
SQSTM1-016ENST0000050828457869aaENSP00000424195
 
Nonsense mediated decay
-D6RBF1 -TSL:4
SQSTM1-008ENST0000045304657273aaENSP00000405061
 
Nonsense mediated decay
-C9J6J8 -TSL:4
SQSTM1-010ENST000005066902405No protein-
 
Processed transcript
---TSL:2
SQSTM1-011ENST000005122341722No protein-
 
Processed transcript
---TSL:2
SQSTM1-014ENST00000506042921No protein-
 
Processed transcript
---TSL:2
SQSTM1-004ENST00000481335562No protein-
 
Processed transcript
---TSL:4
SQSTM1-005ENST00000464493532No protein-
 
Processed transcript
---TSL:4
SQSTM1-007ENST00000466342808No protein-
 
Retained intron
---TSL:2
SQSTM1-006ENST00000485412656No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 7 Coding exons: 7 Transcript length: 2,253 bps Translation length: 356 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS47355

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13501

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000360718.5

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays