Description

sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]

Synonyms

A170, OSIL, p60, p62, p62B, PDB3

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 214 variations and maps to 42 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SQSTM1-001ENST000003898052986440aaENSP00000374455
 
Protein coding
CCDS34317Q13501 NM_003900
NP_003891
TSL:1GENCODE basicAPPRIS P1
SQSTM1-002ENST000003607182253356aaENSP00000353944
 
Protein coding
CCDS47355Q13501 NM_001142298
NM_001142299
NP_001135770
NP_001135771
TSL:1GENCODE basic
SQSTM1-013ENST000005101871714378aaENSP00000424477
 
Protein coding
-E7EMC7 -TSL:5GENCODE basic
SQSTM1-015ENST00000514093842167aaENSP00000427308
 
Protein coding
-E9PFW8 -CDS 3' incompleteTSL:5
SQSTM1-003ENST00000422245628140aaENSP00000394534
 
Protein coding
-C9JRJ8 -CDS 3' incompleteTSL:4
SQSTM1-017ENST00000504627602190aaENSP00000425957
 
Protein coding
-E3W990 -CDS 3' incompleteTSL:5
SQSTM1-201ENST0000062666027473aaENSP00000487071
 
Protein coding
---TSL:5GENCODE basic
SQSTM1-016ENST0000050828457869aaENSP00000424195
 
Nonsense mediated decay
-D6RBF1 -TSL:4
SQSTM1-008ENST0000045304657273aaENSP00000405061
 
Nonsense mediated decay
-C9J6J8 -TSL:4
SQSTM1-010ENST000005066902405No protein-
 
Processed transcript
---TSL:2
SQSTM1-011ENST000005122341722No protein-
 
Processed transcript
---TSL:2
SQSTM1-014ENST00000506042921No protein-
 
Processed transcript
---TSL:2
SQSTM1-004ENST00000481335562No protein-
 
Processed transcript
---TSL:4
SQSTM1-005ENST00000464493532No protein-
 
Processed transcript
---TSL:4
SQSTM1-007ENST00000466342808No protein-
 
Retained intron
---TSL:2
SQSTM1-006ENST00000485412656No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 8 Coding exons: 8 Transcript length: 2,986 bps Translation length: 440 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34317

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13501

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000389805.8

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays